Genic Chromatin Motif

There are 156 Motifs.

Rank Motif Antisense Motif P value TFe Annotation hDPI Logo (match score) hDPI Motif Inaccessible occurrence Accessible occurrence
1CAGGCTGGATCCAGCCTG1.58E-62.52%1.50%
2ACTCCAGCCTAGGCTGGAGT2.46E-62.61%1.55%
3CTCCAGCCTGCAGGCTGGAG2.66E-62.34%1.37%
4TCCAGCCTGGCCAGGCTGGA6.96E-6PIR(5.0) SIRT2 ZNF34 RFXANK ZBTB7A SCAND2 TSNAX KHDRBS1 ZNF655 TP73 MAX IRF3 NFATC1 2.08%1.11%
5AGGCTGGATCCAGCCT6.96E-62.83%1.86%
6GGAGGATCCTCC1.16E-52.03%2.79%
7CTCCAGCCTAGGCTGGAG1.17E-52.65%1.72%
8TCAGATATCTGA1.57E-52.79%1.81%
9GGAGTGCACTCC1.57E-54.82%3.85%
10CACTCCATGGAGTG2.17E-5MEF2A3.40%2.61%
11GCACTCCATGGAGTGC6.26E-53.01%2.30%
12TGCACTCCATGGAGTGCA7.35E-5MTF12.74%1.90%
13GGAGTGCATGCACTCC7.35E-5MTF13.01%2.17%
14GCTGGAGTGCGCACTCCAGC9.51E-52.61%1.86%
15CACTCCAGCGCTGGAGTG9.51E-52.61%1.86%
16ACTCCAGCGCTGGAGT9.51E-53.09%2.34%
17ACACAATTGTGT9.53E-5MYEF2 TFE3 ZNF461 TTRAP SOX9 LIN28 CNBP ZRANB2 1.86%2.74%
18ACTCCATGGAGT9.95E-55.17%4.29%
19TCAGGATCCTGA1.02E-48.71%7.47%
20ACTGCACTCCGGAGTGCAGT1.06E-4MTF11.86%1.19%
21TGGAGTGCAGCTGCACTCCA1.06E-4MTF11.95%1.28%
22GGAGTGCAGCTGCACTCC1.06E-4MTF12.03%1.37%
23CTGGAGTGCATGCACTCCAG1.43E-4MTF12.43%1.59%
24CTGGAGTGCGCACTCCAG1.61E-42.70%1.99%
25CACTCCAGCTGGAGTG1.61E-42.79%2.08%
26CTGCAGCTGCAG1.81E-4NME1 CCDC16 PAXIP1 TRMT1 NPM1 RAB18 CNBP 2.65%2.03%
27CTGGAGTACTCCAG2.06E-4HAND1-TCF33.45%2.70%
28CCCCGCGCGGGG2.37E-4CHES1 NME2 JDP2 ZNF498 ZNF250 SFMBT1 ETV7 ZNF160 PPIE JARID1D ZNF606 CBFA2T3 ZNF385 BCL11A ZBTB4 RCOR3 ZNF34 YBX1 TERF1 SOX9 CNBP SMARCC2 ZNF784 PBX2 ZNF26 LIN28 IRF3 MAX PRDM10 TTRAP 0.80%1.59%
29GCCCAGGCTGCAGCCTGGGC2.73E-4AP2APIR(5.0) 1.77%1.11%
30TCTGCATGCAGA2.73E-42.65%2.03%
31GGAGTGCGCACTCC2.73E-4HAND1-TCF33.32%2.65%
32TCCAGCGCTGGA3.83E-45.66%4.73%
33CAGCCGCGGCTG3.9E-40.44%1.19%
34GGCTGGAGTGCACTCCAGCC3.9E-42.52%1.77%
35ACTCCAGCCGGCTGGAGT3.9E-42.83%2.08%
36CTGTCACGTGACAG5.29E-4ARNTZNF671(6.1) 0.97%1.50%
37ACACAAATTTGTGT5.75E-4FOXO40.93%1.55%
38ATATGATCATAT7.85E-41.24%1.81%
39GAGTGCAGTGCACTGCACTC7.85E-4MTF11.99%1.41%
40ACTGCACTCGAGTGCAGT7.85E-4MTF12.08%1.50%
41GAGTGCAGCTGCACTC7.85E-4MTF12.30%1.72%
42GGGCGACGTCGCCC9.06E-4SOX9VPS4B(6.0) 1.06%0.57%
43CTGTCACCGGTGACAG9.06E-4TITF1ZNF671(6.1) 0.66%1.15%
44CCTGACGTCAGG9.37E-4HTATIP TFE3 ZNF720 FOXN2 ZNF461 CNOT6 JARID1D ZNF34 TSNAX KHDRBS1 ZNF250 HCLS1 ZNF691 CBFA2T3 PRDM10 BCL11A RCOR3 ZNF160 MYEF2 JMJD2C ZNF784 MLX TTRAP SMARCC2 LIN28 ETV7 CNBP ZRANB2 7.34%6.50%
45CCGCACGTGCGG9.62E-40.49%1.11%
46CACACGCGTGTG9.62E-41.02%1.59%
47AGTGCAGCTGCACT9.62E-42.87%2.25%
48AACCCGCGGGTT0.00133TFE3 1.15%0.62%
49GTCGCCGGCGAC0.00133MAX TP53 SEMA4A IRF3 CNBP 1.15%0.62%
50AATAAAAATTTTTATT0.001330.66%1.19%
51TTTAGTAGAGCTCTACTAAA0.001331.46%0.93%
52TCTCTACTAATTAGTAGAGA0.001331.50%0.97%
53GGTGACATGTCACC0.00133NFE2L2(NRF2)1.02%1.55%
54TTAGTAGAGCTCTACTAA0.001331.59%1.06%
55TAGTAGAGATCTCTACTA0.001331.68%1.15%
56TAGTAGAGCTCTACTA0.001331.77%1.24%
57GGTGGATATCCACC0.00133RORA12.03%1.50%
58ACACCCGGGTGT0.001332.12%1.59%
59CACTGCACTAGTGCAGTG0.00133MTF12.12%1.59%
60AACTCCTGACGTCAGGAGTT0.00133RXR/RAR2.12%1.59%
61AGTGCAGTACTGCACT0.00133MTF12.30%1.77%
62CTCTGTCACCGGTGACAGAG0.00156ZNF671(6.1) 0.62%1.06%
63GTGACAGAGCTCTGTCAC0.00156ZNF671(6.1) 0.66%1.11%
64TCTGTCACCGGTGACAGA0.00156ZNF671(6.1) 0.66%1.11%
65TCTGTCACGTGACAGA0.00156ZNF671(6.1) 0.75%1.19%
66GGGTGACGTCACCC0.00156NFE2L2(NRF2)ZNF313(5.2) 0.88%1.33%
67AGGTGGGCCCACCT0.00161HIF1AFF4(6.2) 2.03%1.46%
68TGCACTCGAGTGCA0.001693.45%2.74%
69CTCCAGCCGGCTGGAG0.001742.87%2.25%
70GGCTGGATCCAGCC0.00174CREB13.14%2.52%
71CTGAAATTTCAG0.00174ZNF193(5.2) PRDM10 CNBP LARP1 LIN28 3.93%3.32%
72CAGCCTGGGCCCAGGCTG0.00175AP2APIR(5.0) 2.43%1.77%
73TTTGCTAGCAAA0.00175PRDM10 CNBP LARP1 LIN28 3.58%2.92%
74GCCCAGCTGGGC0.00175GLRX2 ETV7 LIN28 IRF3 MAX 3.76%3.09%
75CTGTCGCGCGACAG0.00227HIFALPHA1.02%0.53%
76TCTGAAATTTCAGA0.00227STAT1ZNF193(5.2) KHDRBS1 LOC93349 PKNOX1 TRMT1 ZBTB4 JMJD2D NPM1 SFMBT1 YBX1 JARID1D SOX9 ZNF498 ZNF34 TERF1 SMARCAL1 RCOR3 NME2 ZNF691 MAX TTRAP METTL3 IRF3 PPIE CNBP PRDM10 LIN28 1.06%0.57%
77TCCTCCTAGGAGGA0.00227STAT5BPPARD KHDRBS1 PRDM10 RCOR3 TERF1 CBFA2T3 PPIE METTL3 YBX1 ZNF784 ZNF691 ETV7 SMARCAL1 IRF3 0.71%1.11%
78TCTCTACTAGTAGAGA0.002272.30%1.81%
79AGTAGAGCTCTACT0.00227SPI12.48%1.99%
80AAGGATATCCTT0.00227METTL3 RAB18 NPM1 CNBP LIN28 PRDM10 2.08%2.56%
81AATTTTTAAAAATT0.00227SOX9SF1(6.4) 2.74%2.25%
82AGTAGATCTACT0.00227GLRX2 ETV7 LIN28 IRF3 MAX 3.80%3.32%
83CTCCTGATCAGGAG0.00249PPARA6.19%5.48%
84GGTGGATCACGTGATCCACC0.002691.02%0.62%
85TGGGCGATCGCCCA0.00269VPS4B(6.0) 1.15%0.62%
86GGGTGACATGTCACCC0.00269RXR/RARZNF313(5.2) 0.80%1.19%
87CAAACCATGGTTTG0.00269SMAD3(5.0) 0.93%1.33%
88CTATCATGATAG0.002691.06%1.59%
89TCAGGAGTTCGAACTCCTGA0.00269RXR/RAR1.72%1.19%
90GGACCTAGGTCC0.002831.19%0.75%
91CTAACATATGTTAG0.002831.77%1.15%
92GAGAAATTTCTC0.00283ING1 TAF1A CBFB MNDA BCL11A GTF2H3 TSNAX MECP2 METTL3 HBP1 LOC93349 TFAM EZH2 ZNF461 RBPJ CBFA2T3 TCF3 PRDM10 SMARCAL1 YBX1 RCOR3 CCNC SCMH1 MAX SOX9 LIN28 KLF3 OTEX CREB5 ZNF498 IRF3 ZNF691 3.76%4.33%
93TCCTGACGTCAGGA0.00283RXR/RAR4.86%4.24%
94CCCAGGCTGGCCAGCCTGGG0.00285AP2APIR(5.0) SIRT2 ZNF34 RFXANK ZBTB7A SCAND2 TSNAX KHDRBS1 ZNF655 TP73 MAX IRF3 NFATC1 2.25%1.68%
95GCACATATGTGC0.00307HSF1 RAN FOXP4 LIN28 USF2 ZNF345 ZNF124 ZHX3 IKZF1 METTL3 YBX1 ZNF34 ETV7 CREB5 TTRAP ZNF691 ZBTB22 PBX2 SMARCAL1 SOX9 OTEX NME2 RCOR3 IRF8 ZNF498 NFATC1 IRF3 MAX 3.98%3.27%
96CAGGCTGGCCAGCCTG0.00348SIRT2 ZNF34 RFXANK ZBTB7A SCAND2 TSNAX KHDRBS1 ZNF655 TP73 MAX IRF3 NFATC1 5.92%5.22%
97CTACTATAGTAG0.003882.52%2.08%
98TGCCACGTGGCA0.00388BAD(5.2) ING1 HMGN1 RCOR3 ZNF606 TTRAP RAN CNOT6 TRIM32 ZNF498 SMARCAL1 LOC93349 MNDA KHDRBS1 YBX1 PRDM10 IRF3 ZNF691 MAX 3.80%3.14%
99CCAGCTAGCTGG0.00388GLRX2 ETV7 LIN28 IRF3 MAX 5.53%4.86%
100GCTGGAGCTCCAGC0.00426HIFALPHA4.11%3.49%
101CGACAGCTGTCG0.00451.06%0.57%
102AACTCCTGATCAGGAGTT0.0045RXR/RAR2.30%1.81%
103TCCAACGTTGGA0.00455RBM9 MAX CNBP LIN28 PRDM10 1.41%1.90%
104GTGACATGTCAC0.004551.99%2.56%
105GGTTTGCAAACC0.004552.12%2.70%
106GGTCTCGATCGAGACC0.004552.96%2.39%
107GTCAGGAGCTCCTGAC0.00455RXR/RAR4.29%3.71%
108CACGCCGGCGTG0.00461MAX SEMA4A ZNF26 IRF3 2.43%3.27%
109GGCAGAGGCCTCTGCC0.00467RXR/RAR1.02%0.66%
110AATCATGCATGATT0.00467SRFMAX PLAGL1 ZBTB25 1.06%0.71%
111TCTCATTGCAATGAGA0.00467HMG20A(5.5) ZBTB43(5.5) KLF3(5.1) ENO1(6.8) PLAGL1(6.6) 1.06%0.71%
112AAGCTTAAGCTT0.00467ZNF461 ZNF691 0.80%1.15%
113GTGATCCACGTGGATCAC0.004671.28%0.93%
114ACATACGTATGT0.004672.03%1.55%
115TGGTCTCGATCGAGACCA0.00467SMAD3(5.0) 2.74%2.21%
116ATCCACGTGGAT0.004673.05%2.52%
117CCAGGCTGGCCAGCCTGG0.00467PIR(5.0) SIRT2 ZNF34 RFXANK ZBTB7A SCAND2 TSNAX KHDRBS1 ZNF655 TP73 MAX IRF3 NFATC1 4.55%3.85%
118TGCACTAGTGCA0.00518GPAM LIN28 CNBP 4.64%3.89%
119ACGCCATGGCGT0.005330.93%1.59%
120AGGTCAGGATCCTGACCT0.00603RXR/RARCREB1(6.6) ZNF655(7.5) ZNF313(6.4) RXRA(6.8) USF2 RCOR3 RBM9 GLRX2 ZNF606 CBFA2T3 YBX1 HTATIP IRF3 ESRRA MAX 3.49%2.87%
121TGCACACGTGTGCA0.00664HIFALPHA0.62%1.02%
122TGTCGCCGGCGACA0.00664MAX TP53 SEMA4A IRF3 CNBP 1.02%0.62%
123TTGATATATCAA0.006640.80%1.19%
124CAGTGTGCACACTG0.006641.33%0.93%
125GCTAATTTTTAAAAATTAGC0.00664PQBP1(6.6) SF1(6.4) PLAGL1(6.8) 1.72%1.33%
126CTAATTTTTAAAAATTAG0.00664PQBP1(6.6) SF1(6.4) PLAGL1(6.8) 1.90%1.50%
127AAAAATTATAATTTTT0.00664SF1(6.4) 2.08%1.68%
128TAGTAGATCTACTA0.00664T2.17%1.77%
129GAGCCATGGCTC0.00664LOC93349 PRDM10 PPIE ZNF691 CNBP TTRAP LIN28 2.52%2.92%
130AGCCTATAGGCT0.007281.19%1.72%
131GGTGACGTCACC0.00728IRF8 BCL11A TTRAP RBPJ SMAD3 NRF1 MAX SOX9 ETV7 LOC93349 KLF3 PBX2 IRF3 SMARCC2 CNBP 1.59%2.12%
132CTGGGCGCGCCCAG0.00751HIFALPHA1.19%0.75%
133TACAGTACTGTA0.007511.19%1.64%
134GCCCAGGCTAGCCTGGGC0.00751AP2APIR(5.0) 1.86%1.41%
135CTTCAGCTGAAG0.00751NCALD ZNF461 LIN28 LOC93349 ZBTB4 CNOT6 TERF1 MNDA RBPJ CBFA2T3 TCF7 PPIE ZNF498 ZNF34 TFAM ETV7 PRDM10 CREB5 ZNF606 MAX YBX1 OTEX SMARCAL1 ZNF784 KHDRBS1 RCOR3 ZNF691 IRF3 1.95%1.50%
136GTCAGGAGTACTCCTGAC0.00751RXR/RAR2.21%1.77%
137GACCACGTGGTC0.00762CREB1 CREB3L1 IRF3 TFEB NRF1 USF1 USF2 MAX MLX 1.02%1.50%
138ACCTCTAGAGGT0.00762ZNF510 CCDC16 NME1 ZNF313 TRMT1 LIN28 NPM1 RAB18 CNBP 2.03%1.55%
139CTGTGATCACAG0.00762CEBPG(5.9) SOX9 PRDM10 ZRANB2 IRF3 CNBP LIN28 2.03%1.55%
140TGATTCGAATCA0.00762TTRAP YBX1 SOX9 SMARCAL1 ZBTB22 KHDRBS1 IRF8 ZNF691 ZNF498 MAX IRF3 2.52%2.03%
141GTAGAGATCTCTAC0.00762SOX92.87%2.39%
142GTCTTTAAAGAC0.00762CBFA2T3 ZNF76 RBPJ ZBTB22 TFAM OTEX ING1 IRF8 MAX NFATC1 ZNF498 IRF3 3.85%3.36%
143TCTCAATATTGAGA0.00814EBF1PLAGL1(6.0) IRF8 MAX MLLT3 ZNF498 RXRA IRF3 0.71%1.02%
144CATTCTCAGCTGAGAATG0.008141.02%0.71%
145CTGTATTAATACAG0.008140.80%1.11%
146CAAAGACGTCTTTG0.00814SOX101.24%0.93%
147AATGGGATCCCATT0.00814RORA1KLF3(5.5) SMARCAL1 RXRA ZNF193 LIN28 TRMT1 GPAM MAX PPIE RCOR3 HMG20A ZNF691 CNBP ZNF34 RAB18 METTL3 PRDM10 1.41%1.11%
148ATGTTATAACAT0.008143.09%2.48%
149CTCCTGACCTAGGTCAGGAG0.00814RXR/RARCREB1(6.6) ZNF655(7.5) ZNF313(6.4) RXRA(6.8) USF2 RCOR3 RBM9 GLRX2 ZNF606 CBFA2T3 YBX1 HTATIP IRF3 ESRRA MAX 3.40%2.79%
150CATGGTGCACCATG0.00814SRFCREB3L1(5.5) 4.02%3.40%
151CACTGCGCAGTG0.009016.68%6.01%
152CACGCCATGGCGTG0.00931HIF10.71%1.28%
153TTCAGATCTGAA0.00931KHDRBS1 LOC93349 PKNOX1 TRMT1 ZBTB4 JMJD2D NPM1 SFMBT1 YBX1 JARID1D SOX9 ZNF498 ZNF34 TERF1 SMARCAL1 RCOR3 NME2 ZNF691 MAX TTRAP METTL3 IRF3 PPIE CNBP PRDM10 LIN28 2.48%1.99%
154AAGAAATTTCTT0.00931MYEF2 ZNF34 YBX1 ZNF691 LIN28 TTRAP PPIE 4.55%4.02%
155TTTTGATCAAAA0.00931PRDM10 ZNF160 METTL3 ETV7 ZNF784 ING1 CBFA2T3 OTEX YBX1 MAX RCOR3 TCF7 IRF3 CREB5 KHDRBS1 SMARCAL1 ZNF691 4.55%3.98%
156CAGCCTGGCCAGGCTG0.00943CREB1PIR(5.0) SIRT2 ZNF34 RFXANK ZBTB7A SCAND2 TSNAX KHDRBS1 ZNF655 TP73 MAX IRF3 NFATC1 4.91%4.20%